Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015820331.1_cds_XP_016500343.1_14181
CDS Infomation

[gene=LOC107818810] [db_xref=GeneID:107818810] [protein=endonuclease MutS2-like] [protein_id=XP_016500343.1] [location=complement(join(28..597,754..1687,2226..2722))] [gbkey=CDS]
Sequence

ATGAACCTCTTAAACTGCAAATTCAACAACACTCTCCTCACCAATCATCTTCCTCCACGT
CATACCTCGCTCTACAACCCTCGTGCAACTCGGTTCTCCGTCCGCTTCTCATCCGAGTCA
ACTCACAGAGTCAAACTCGCCGAGTCACTCCAATCCGAGACCCTGAAGCTTCTAGAATGG
CCCGCCGTCTGTCGCCAGCTCTCCGCCTTCACTTCCACATCCATGGGCTTCGCTGCCGCA
CAATCTGCTGTGATTCCGGTGGGTAAAACTCCTGAAGAGAGCGGGAAACTCCTCTCTCAG
ACCTCCGCCGCCGTGGCAGTTCCTCGGCCGTTGGATTTCTCCGGAATTGAGGATGTTTCC
CCTATTGTTAATGCTTCCATTGCCGGCGGAGTACTCTCAATTCGTGAGCTTTGCTCTGTG
AAACGGACCTTGGGAGCGGCGAGGCTTTTGCTCCAACAGTTGGAGGAAATTGCTTCGCTG
AGTGATTTTTCTGACAGGTACTCTCCTCTGAAGGAAATTCTTCACAATTGTGATTTTCTT
GTGGAATTGGAGCAAAAAATAGAATTCTGTATTGATTGCAGCTTTTCAGCAATCCTTGAC
AGAGCTAGTGAAGATTTGGAAATTATAAGGTCTGAGAGAAAACGGAACATGGGAAATCTA
GAATCATTGTTGAAGCAATTATCAACTCAAGTTTTTCAGGGTGGGGGATTTGACAGACCT
TTAGTAACCAAGCGCCGTTCAAGACTGTGTGTTGCTGTCAGAGCTTCCCATAGATCTTTG
CTTCCTAATGCCGTAATCCTAGATACGAGCAGTAGTGGATCTACATATTTCATGGAACCT
AAAGAGGCAGTTGAGTTGAACAACATGGAAGTTAAGCTTTCTAGTTCTGAGAGGATTGAG
GAGCAAACAATTTTGAGTTTGCTTACATCGGAAATAGCTGAATCTAATATGAAAATAAAA
CACTTATTAGATAGAATATTGGAAATTGATCTTGCATTTGCAAGAGCTGCTCATGCTCAA
TGGATAGGTGGTGCCTGTCCAGCTTTAAGTTCAAGAAATTGTAACAATTCCCAATCTGAA
CTTTTATCTATAGATGTAGAAGGGATACGGCATCCATTGCTTCTTGAGTCCTCTTTGAGA
AACTTGTCCACTGATGTGTTCCCAAGGTCGCCTGATTTGGATCAGGGAAATGGTGTCATG
AATTTTGAAACAAAATCTAGTGCACATTTCCCTGTGCCCATCGATATTAAAGTTGGTCAT
GGAACAAAGGTTGTTGTCATCTCGGGCCCTAATACTGGAGGGAAAACGGCTTCAATGAAG
ACTCTAGGACTGGCTTCTATGATGTTGAAAGCCGGTATGTATTTGCCTGCCCAAAATCAA
CCACGGCTTCCATGGTTTGATCTCATTCTGGCAGACATAGGAGACCAGCAGTCTCTGGAA
CAAAGTCTGTCAACCTTTAGTGGGCACATTTCACGGCTTCGTGAGATTCTGGAAGTCGCT
TCTAGAGAATCTTTAGTTCTTATTGATGAAATCGGAAGTGGGACCGATCCTTCAGAAGGT
GTAGCACTTTCAGAAAGCATTCTGCAATATCTCAAGGACAGGGTTAATTTAGCTGTTATA
ACTACCCACTATGCAGATTTAACTCGCTTAAAAGAAAAGGACAATCGGTTTGAAACTGCA
GCAACAGAGTTTTCCTTGGAGACTCTACAGCCTACCTATCGGATTCTTTGGGGAAGCAAG
GGAGAATCGAATGCCTTAAATATTGCAAAATCAATGGGCTTTGATGAAAGAATAATTGAC
CGAGCAGTATTATGGGTGAACAAATTGACACCGGACAAGCAGCAGGAGCAGAAGGGATTA
CTTTATCGTTCACTAATTGAAGAAAGTGACAGACTAGAATATCAAGCAATGGAAGCTGCT
TCTCTTCATTCAGATATTATGAACATTTATAATGAGGTATATTCTGAAGCTTTTCCTGAA
TTCATACTCCCATTCATATAA

Peptide Sequence

PEP ID

XP_016500343.1
PEP Infomation

PREDICTED: endonuclease MutS2-like [Nicotiana tabacum]
Sequence

MNLLNCKFNNTLLTNHLPPRHTSLYNPRATRFSVRFSSESTHRVKLAESLQSETLKLLEW
PAVCRQLSAFTSTSMGFAAAQSAVIPVGKTPEESGKLLSQTSAAVAVPRPLDFSGIEDVS
PIVNASIAGGVLSIRELCSVKRTLGAARLLLQQLEEIASLSDFSDRYSPLKEILHNCDFL
VELEQKIEFCIDCSFSAILDRASEDLEIIRSERKRNMGNLESLLKQLSTQVFQGGGFDRP
LVTKRRSRLCVAVRASHRSLLPNAVILDTSSSGSTYFMEPKEAVELNNMEVKLSSSERIE
EQTILSLLTSEIAESNMKIKHLLDRILEIDLAFARAAHAQWIGGACPALSSRNCNNSQSE
LLSIDVEGIRHPLLLESSLRNLSTDVFPRSPDLDQGNGVMNFETKSSAHFPVPIDIKVGH
GTKVVVISGPNTGGKTASMKTLGLASMMLKAGMYLPAQNQPRLPWFDLILADIGDQQSLE
QSLSTFSGHISRLREILEVASRESLVLIDEIGSGTDPSEGVALSESILQYLKDRVNLAVI
TTHYADLTRLKEKDNRFETAATEFSLETLQPTYRILWGSKGESNALNIAKSMGFDERIID
RAVLWVNKLTPDKQQEQKGLLYRSLIEESDRLEYQAMEAASLHSDIMNIYNEVYSEAFPE
FILPFI

Transcript Sequence

Gene sequence data has not been registered.